SubtiBank SubtiBank
ynfC [2019-02-19 19:32:48]
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ynfC [2019-02-19 19:32:48]

unknown
locus
BSU18110
pI
10.22
mw
15.23 kDa
protein length
136 aa Sequence Blast
gene length
411 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,938,066 1,938,476

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]
    description
    [Pubmed|21815947]

    additional information

  • the mRNA is substantially stabilized upon depletion of [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] (the half-life of the mRNA increases from 3.5 to 50 min) [PubMed|21815947]
    • view in new tab

    Biological materials

    Mutant

  • GP1966 ([gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]::''gfp erm''), available in [SW|Jrg Stlke]'s lab
  • BKE18110 ([gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTAAAAGTAAACCTGA, downstream forward: _UP4_TAACGAAAATATGAGGAGGC
  • BKK18110 ([gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTAAAAGTAAACCTGA, downstream forward: _UP4_TAACGAAAATATGAGGAGGC

    • References

  • 21815947